This paper try to comparative multi-function of urban modern agriculture of Shanghai, Nanjing and Hangzhou for example, and use the method of combing static and dynamic and of combing qualitative and quantitative to comparative and analyze the urban modern agriculture functions of economy, ecology and society. It can be seen that the differences on economic mainly in the difference of structure of agricultural land only for the difference of types of terrain of three cities, which affect the structure of agriculture industry. Ratio of agro-structural change decreases gradually. Advantage indexes of animal husbandry and fisheries of Shanghai are higher, farming, fisheries and agricultural services of Nanjing, forestry and animal husbandry of Hangzhou are higher as well. The production capacity of vegetables of Shanghai and the production capacity of grain of Nanjing and the production capacity of fruit of Hangzhou is higher than that of others separately in 2010. Secondly, the value of farmland ecosystem carbon sequestration and oxygen releasing of Nanjing is lowest in 2010. Optimal adjustment of the agricultural space layout maintains the ecological environment. The pesticide and chemical fertilizer excessive remains a serious problem. Lastly, agricultural tourism of three cities is in the leisure stage towards the holiday stage. Meanwhile, the three cities take different leisure agriculture development models, and achieve results in employment and economic benefits.